Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACGAATCTGGTAGCTGCT
..((((((((.(((((.(((.&))).))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173562
GeneSymbolKCTD20
Binding site1279,1301
Score0.846
Seed1
Au0.5
Energy-19.9
Binding len22
Me-7.782
Phylopstem-0.1281808125
Phylopflank0.15465247500000015
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure