Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGGCGCAGCAGCTGGGGTCCTCCACCACCGCGGCTGCC
..(((((((((((.((.(((.&.)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173564
GeneSymbolNYAP1
Binding site1707,1750
Score0.846
Seed1
Au0.25
Energy-25.9
Binding len21
Me-5.814
Phylopstem0.4007802909090909
Phylopflank0.82483101325
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure