Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCGCAGCCTTTCAAGGCGGTTGTAC
.(((((((((((((((.((((&)))).)))))).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173565
GeneSymbolRSPH10B
Binding site572,600
Score1.0
Seed1
Au0.5
Energy-20.9
Binding len28
Me-3.793
Phylopstem2.9580286136363636
Phylopflank2.4169594400000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure