Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTAGGCTCAGGTAGACCTGGCGACGACGGGGCTGCAGCTGCAGG
((((((((((((((((.((((&.)))).)))........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173566
GeneSymbolPRR14L
Binding site49,95
Score0.846
Seed1
Au0.265
Energy-27.3
Binding len31
Me-3.938
Phylopstem-0.4833344041666665
Phylopflank-0.6626647100000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure