Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCAC
.((((((((((((((..((((&.))))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173570
GeneSymbolZDHHC23
Binding site120,161
Score1.0
Seed1
Au0.368
Energy-24.6
Binding len23
Me-4.026
Phylopstem0.29034012142857135
Phylopflank1.6444602437499998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure