Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTTAAGAGGAAGGGCCGGG
..(((((.((((((((((((((&)))))))....)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173593
GeneSymbolB4GALNT3
Binding site5370,5394
Score0.962
Seed0
Au0.441
Energy-26.7
Binding len24
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure