Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACGGCACTGGAGCTGCAGG
((((((((.(((.(((..(((&)))...)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173593
GeneSymbolB4GALNT3
Binding site4909,4931
Score0.846
Seed1
Au0.368
Energy-22.1
Binding len22
Me-6.283
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure