Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGAGGGCTGATGGGGCCAGTGG
((((((((((.((((.(((...&))).)))).....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173596
GeneSymbolSLC39A5
Binding site1853,1877
Score0.923
Seed1
Au0.338
Energy-23.5
Binding len24
Me-6.995
Phylopstem0.1996018
Phylopflank-0.21018900999999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure