Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTTCCCCGAGCAGCTGCC
..((((((((((..((..(((&))).))..))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349337
GeneSymbolFOXP1
Binding site3196,3219
Score1.0
Seed1
Au0.382
Energy-21.2
Binding len23
Me-7.103
Phylopstem1.4657715857142857
Phylopflank1.1924921762499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure