Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAATTTCCCCTGGAGCAAGTAGAACGACTGGGGCTGCAC
.(((((((.(((((((.....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173600
GeneSymbolMUC19
Binding site22290,22333
Score1.0
Seed1
Au0.456
Energy-23.8
Binding len17
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure