Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCAGTTCAGTCAGGG
.((((((......(((((((..&))))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173601
GeneSymbolGXYLT1
Binding site3002,3021
Score0.923
Seed1
Au0.559
Energy-17.2
Binding len19
Me-15.867
Phylopstem0.2835906
Phylopflank-0.29502736
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure