Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAATATGTCAGGTG
((((((((((...((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173601
GeneSymbolGXYLT1
Binding site5859,5875
Score0.846
Seed1
Au0.588
Energy-16.5
Binding len16
Me-11.398
Phylopstem-0.17134674
Phylopflank-0.04401577625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure