Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGGGTGAGGAACTTGTTGCGCCCGCGGCTGCGC
.(((((((((((.(((((.(.&.).))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173601
GeneSymbolGXYLT1
Binding site117,154
Score0.846
Seed1
Au0.265
Energy-26.5
Binding len21
Me-5.082
Phylopstem1.097674
Phylopflank2.91942673375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure