Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCTAGAGCGAGGGGCCT
....(((((((((((((((((.&)))))))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173615
GeneSymbolVWA3A
Binding site4044,4064
Score0.987
Seed0
Au0.426
Energy-25.3
Binding len20
Me-9.547
Phylopstem0.5082389473684209
Phylopflank0.9435264124999995
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure