Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGGCTGGGGAGCGGAAGCCATCAGTGG
(((((((((((((((((((...&))))))))...)))))).........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173619
GeneSymbolCLEC18C
Binding site50,82
Score0.846
Seed1
Au0.294
Energy-24.8
Binding len32
Me-3.938
Phylopstem1.8363116677419358
Phylopflank1.82300022
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end5
Position5UTR
2D Structure