Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCTCTAAGAAACAAGGCAGCTGTT
..((((((((((((((.....&)))))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173625
GeneSymbolC17orf78
Binding site1252,1280
Score0.808
Seed1
Au0.544
Energy-19.3
Binding len28
Me-4.957
Phylopstem0.06793321481481482
Phylopflank0.11599011000000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure