Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGAGATAGCAGTTGCC
..((((((((.(((...((((&))))....))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173625
GeneSymbolC17orf78
Binding site166,187
Score0.846
Seed1
Au0.485
Energy-18.4
Binding len21
Me-8.75
Phylopstem0.057889325000000005
Phylopflank0.10965395000000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure