Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AAGGATTTGATGACTGCAGCTGTAT
.(((((((((((((((.((((&.)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173628
GeneSymbolDNAH17
Binding site1655,1680
Score0.846
Seed1
Au0.529
Energy-23.5
Binding len22
Me-3.793
Phylopstem-0.15801713333333334
Phylopflank0.05525726224999998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure