Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCTCTCCAGAAGTAATAGC
..(((((((((((((...((.&))...))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_173630
GeneSymbolRTTN
Binding site6887,6906
Score0.846
Seed1
Au0.529
Energy-17.4
Binding len19
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure