Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAAAGAGTAGCTGCAAA
((((((((((..((...(((.&)))...))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173630
GeneSymbolRTTN
Binding site5599,5620
Score0.923
Seed1
Au0.574
Energy-20.7
Binding len21
Me-11.078
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure