Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTATACTGCCAGCTTGCAAT
(((((((((((((....(((.&)))....))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173630
GeneSymbolRTTN
Binding site5395,5418
Score0.923
Seed1
Au0.485
Energy-19.6
Binding len23
Me-5.763
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure