Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGAGCCTGGCGTCCTGTGTCCCTGCTTCCTCCGTGCTGCC
..(((((.(((((((((((((&)))))))))...........................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173636
GeneSymbolWDR62
Binding site3580,3626
Score0.846
Seed0
Au0.368
Energy-21.5
Binding len46
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure