Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCACACCAGCTGCGT
.((((((((..(.((((((..&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173642
GeneSymbolRIMKLA
Binding site9070,9088
Score1.0
Seed1
Au0.618
Energy-21.5
Binding len18
Me-9.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure