Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTCATTGTATTGCCAGT
..(((((((((((((..(((..&)))..)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173648
GeneSymbolCCDC141
Binding site8362,8382
Score1.0
Seed1
Au0.559
Energy-19.4
Binding len20
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure