Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGATATGTCAGTGG
.(((((((((...((((((...&))))))..)))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173648
GeneSymbolCCDC141
Binding site939,958
Score0.846
Seed1
Au0.574
Energy-17.0
Binding len19
Me-11.254
Phylopstem0.18142925
Phylopflank0.3452644325
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure