Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGAAGCCCTGAGTCCCCTCTTGCACCATCTGACATGGAGGTGG
((((((((((((((((((.(((&))))))))))))....)))))........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173648
GeneSymbolCCDC141
Binding site3849,3899
Score0.846
Seed1
Au0.397
Energy-21.4
Binding len50
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure