Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTGCTCTAATGTTTCTGCAAAGAACCTACAGCAGCAGCTGGAGC
((.(((((((.(((((.((((&.))))))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173648
GeneSymbolCCDC141
Binding site2766,2816
Score0.846
Seed0
Au0.485
Energy-24.9
Binding len22
Me-8.32
Phylopstem1.4895340000000001
Phylopflank1.0214385925000002
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure