Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCCTAACTGCTGTTGCC
..(((((.(((((((((((((&)))))))..)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173648
GeneSymbolCCDC141
Binding site6767,6789
Score0.923
Seed0
Au0.632
Energy-20.5
Binding len22
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure