Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGTGGAGGTTGCAGTGA
(((((.(((((((((((((...&)))))))))..))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173650
GeneSymbolDNAJC5G
Binding site195,220
Score1.0
Seed0
Au0.426
Energy-22.8
Binding len25
Me-5.839
Phylopstem0.10256226666666667
Phylopflank0.18546334999999992
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position5UTR
2D Structure