Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCGGGCAGCCGTGGTGGACCGGAAAGGACCTCTAGTGA
((((((.((((((((((.....&.))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173659
GeneSymbolRPUSD3
Binding site228,268
Score0.846
Seed0
Au0.397
Energy-23.9
Binding len21
Me-5.481
Phylopstem-0.32325413
Phylopflank0.05209336000000001
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure