Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCTCAGCCTCCCGAGTAGCTGCGAT
(((((((((((((((..((((&.))))..)))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173664
GeneSymbolARL10
Binding site9505,9539
Score0.846
Seed1
Au0.353
Energy-26.4
Binding len29
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure