Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173672
GeneSymbolPPIL6
Binding site2521,2554
Score0.846
Seed1
Au0.397
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.13582795454545457
Phylopflank0.005989175999999999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure