Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGCTGTGAGCCGGG
..(((((((....(((((.((.&)))))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173678
GeneSymbolTCAF2
Binding site1470,1489
Score0.846
Seed1
Au0.426
Energy-22.5
Binding len19
Me-13.66
Phylopstem1.188767014285714
Phylopflank1.0202168375
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure