Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTCAACTGCTTCCTGGCGGCTGCT
..((((((((((..(((((((&))))........)))..))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173678
GeneSymbolTCAF2
Binding site804,834
Score0.923
Seed1
Au0.309
Energy-21.3
Binding len30
Me-7.103
Phylopstem3.3983869499999995
Phylopflank3.2627494224999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure