Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCTACCCCAGCTGTC
..(((((((.(((....((((&))))...))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173685
GeneSymbolNSMCE2
Binding site988,1007
Score0.846
Seed1
Au0.397
Energy-18.8
Binding len19
Me-8.025
Phylopstem0.6408991285714286
Phylopflank1.1417207169
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure