Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCTTCCGCCATGCTGCGGG
(((((((.((((..(((((((&)))))..))..))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173689
GeneSymbolCRB2
Binding site946,972
Score0.846
Seed1
Au0.338
Energy-23.5
Binding len26
Me-8.397
Phylopstem0.29992855555555553
Phylopflank0.2554480125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure