Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTTTTGTTGCCCAGGTTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173690
GeneSymbolSCAI
Binding site3291,3325
Score1.0
Seed1
Au0.412
Energy-28.9
Binding len24
Me-10.109
Phylopstem2.186830718181818
Phylopflank2.1317592212500003
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure