Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCAGTGTGGGGTTAGC
..((((((((...((((.(((.&))).))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173694
GeneSymbolATP11C
Binding site5529,5549
Score1.0
Seed1
Au0.588
Energy-22.3
Binding len20
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure