Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGGCCAATTTGGAAAGGGGGAAGGAGCCACCCCAAAACGGTGG
(((((((((((((((((.(((.&))).)))............)))))))))))..........))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173694
GeneSymbolATP11C
Binding site4456,4500
Score0.846
Seed1
Au0.485
Energy-21.6
Binding len44
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure