Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGACAATTGTAGTTGG
...(((((((((((((..((.&))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173698
GeneSymbolFAM133A
Binding site1406,1424
Score0.923
Seed0
Au0.735
Energy-19.5
Binding len18
Me-6.515
Phylopstem0.31970857692307697
Phylopflank0.5704217524999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure