Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCAACTGAGAGTCTGCC
..((((((.(((((((((((.&))))).))))))..)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173698
GeneSymbolFAM133A
Binding site272,294
Score0.846
Seed1
Au0.5
Energy-19.4
Binding len22
Me-6.013
Phylopstem0.8849166583333333
Phylopflank1.4057229559999997
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure