Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATTTTGTGATGCTGGGA
.((((((((((((.((((....&)))).))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173791
GeneSymbolPDZD8
Binding site6821,6840
Score0.846
Seed1
Au0.632
Energy-17.8
Binding len19
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure