Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGGCTGGAGTGCAGTGG
((((((((((..((((((.(((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173791
GeneSymbolPDZD8
Binding site5611,5634
Score0.923
Seed1
Au0.382
Energy-27.1
Binding len23
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure