Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGATGCAGCTGCAC
.(((((((((.(((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173791
GeneSymbolPDZD8
Binding site2140,2155
Score1.0
Seed1
Au0.588
Energy-20.9
Binding len15
Me-6.618
Phylopstem2.823306944444445
Phylopflank1.6879344824999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure