Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTGATGCCTGGG
.((.(((((...((((((....&))))))...))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173793
GeneSymbolC22orf39
Binding site2050,2068
Score0.846
Seed0
Au0.5
Energy-18.6
Binding len18
Me-14.239
Phylopstem0.40863005
Phylopflank0.3987697037500001
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure