Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAAGAGCAGGAGCATCTAAAGAGGAGCCAGC
..(((((((((((.(((((...&.))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173793
GeneSymbolC22orf39
Binding site1541,1574
Score0.904
Seed1
Au0.426
Energy-24.1
Binding len19
Me-5.814
Phylopstem-0.45739821818181814
Phylopflank0.03530568250000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure