Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGTTCGAGACCAGC
..(((((((.(((((((((...&)))))))))...))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173793
GeneSymbolC22orf39
Binding site2583,2604
Score0.923
Seed1
Au0.426
Energy-22.5
Binding len21
Me-6.2
Phylopstem-0.4783931444444445
Phylopflank-0.26591242500000006
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure