Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCTTCCCCGAGCAGCTGCC
..((((((((((..((..(((&))).))..))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349343
GeneSymbolFOXP1
Binding site3214,3237
Score1.0
Seed1
Au0.382
Energy-21.2
Binding len23
Me-7.103
Phylopstem0.39749509285714285
Phylopflank1.3656538062499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure