Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCGACTGCTGCTGCAT
.((((((.(((((((..((((&))))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173800
GeneSymbolLVRN
Binding site563,584
Score1.0
Seed1
Au0.324
Energy-27.1
Binding len21
Me-6.34
Phylopstem0.28441557142857143
Phylopflank0.004272370000000053
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure