Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGAATGTTTGCTAGA
..((((((.(((.((((((...&))))))...))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173803
GeneSymbolMPV17L
Binding site5598,5618
Score0.846
Seed1
Au0.735
Energy-17.4
Binding len20
Me-7.303
Phylopstem0.44659133666666667
Phylopflank0.22141514475
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure